VTK  9.1.0
vtkNIFTIImageWriter.h
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1/*=========================================================================
2
3 Program: Visualization Toolkit
4 Module: vtkNIFTIImageWriter.h
5
6 Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
7 All rights reserved.
8 See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
9
10 This software is distributed WITHOUT ANY WARRANTY; without even
11 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
12 PURPOSE. See the above copyright notice for more information.
13
14=========================================================================*/
33#ifndef vtkNIFTIImageWriter_h
34#define vtkNIFTIImageWriter_h
35
36#include "vtkIOImageModule.h" // For export macro
37#include "vtkImageWriter.h"
38
39class vtkMatrix4x4;
41
42class VTKIOIMAGE_EXPORT vtkNIFTIImageWriter : public vtkImageWriter
43{
44public:
46
52
56 void PrintSelf(ostream& os, vtkIndent indent) override;
57
59
65 vtkSetMacro(NIFTIVersion, int);
66 vtkGetMacro(NIFTIVersion, int);
68
70
74 vtkSetStringMacro(Description);
75 vtkGetStringMacro(Description);
77
79
85 vtkGetMacro(TimeDimension, int);
86 vtkSetMacro(TimeDimension, int);
87 vtkGetMacro(TimeSpacing, double);
88 vtkSetMacro(TimeSpacing, double);
90
92
100 vtkSetMacro(RescaleSlope, double);
101 vtkGetMacro(RescaleSlope, double);
102 vtkSetMacro(RescaleIntercept, double);
103 vtkGetMacro(RescaleIntercept, double);
105
107
114 vtkGetMacro(PlanarRGB, bool);
115 vtkSetMacro(PlanarRGB, bool);
116 vtkBooleanMacro(PlanarRGB, bool);
118
120
125 vtkSetMacro(QFac, double);
126 vtkGetMacro(QFac, double);
128
137 vtkMatrix4x4* GetQFormMatrix() { return this->QFormMatrix; }
138
147 vtkMatrix4x4* GetSFormMatrix() { return this->SFormMatrix; }
148
150
160
161protected:
164
168 int GenerateHeader(vtkInformation* info, bool singleFile);
169
174 vtkInformationVector* outputVector) override;
175
182 static char* ReplaceExtension(const char* filename, const char* ext1, const char* ext2);
183
185
191
193
199
203 double QFac;
204
206
212
217
219
226
231
232private:
234 void operator=(const vtkNIFTIImageWriter&) = delete;
235};
236
237#endif // vtkNIFTIImageWriter_h
Writes images to files.
a simple class to control print indentation
Definition: vtkIndent.h:113
Store zero or more vtkInformation instances.
Store vtkAlgorithm input/output information.
represent and manipulate 4x4 transformation matrices
Definition: vtkMatrix4x4.h:145
Store NIfTI header information.
Write NIfTI-1 and NIfTI-2 medical image files.
void SetNIFTIHeader(vtkNIFTIImageHeader *hdr)
Set the NIFTI header information to use when writing the file.
double TimeSpacing
The size and spacing of the Time dimension to use in the file.
void PrintSelf(ostream &os, vtkIndent indent) override
Print information about this object.
vtkNIFTIImageHeader * OwnHeader
The header information.
vtkMatrix4x4 * SFormMatrix
The orientation matrices for the NIFTI file.
double QFac
Is -1 if VTK slice order is opposite to NIFTI slice order, +1 otherwise.
bool PlanarRGB
Use planar RGB instead of the default (packed).
double RescaleSlope
Information for rescaling data to quantitative units.
char * Description
A description of how the file was produced.
int TimeDimension
The size and spacing of the Time dimension to use in the file.
vtkNIFTIImageHeader * GetNIFTIHeader()
Set the NIFTI header information to use when writing the file.
void SetQFormMatrix(vtkMatrix4x4 *)
Set the "qform" orientation and offset for the image data.
static char * ReplaceExtension(const char *filename, const char *ext1, const char *ext2)
Make a new filename by replacing extension "ext1" with "ext2".
int GenerateHeader(vtkInformation *info, bool singleFile)
Generate the header information for the file.
~vtkNIFTIImageWriter() override
vtkMatrix4x4 * QFormMatrix
The orientation matrices for the NIFTI file.
vtkMatrix4x4 * GetSFormMatrix()
int RequestData(vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) override
The main execution method, which writes the file.
int NIFTIVersion
The header information.
double RescaleIntercept
Information for rescaling data to quantitative units.
static vtkNIFTIImageWriter * New()
Static method for construction.
vtkNIFTIImageHeader * NIFTIHeader
The header information.
vtkMatrix4x4 * GetQFormMatrix()
void SetSFormMatrix(vtkMatrix4x4 *)
Set a matrix for the "sform" transformation stored in the file.