VTK
9.1.0
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Mapper that draws vtkMolecule objects. More...
#include <vtkMoleculeMapper.h>
Public Types | |
enum | { CovalentRadius = 0 , VDWRadius , UnitRadius , CustomArrayRadius } |
enum | { SingleColor = 0 , DiscreteByAtom } |
typedef vtkMapper | Superclass |
Public Types inherited from vtkMapper | |
typedef vtkAbstractMapper3D | Superclass |
Public Types inherited from vtkAbstractMapper3D | |
typedef vtkAbstractMapper | Superclass |
Public Types inherited from vtkAbstractMapper | |
typedef vtkAlgorithm | Superclass |
Public Types inherited from vtkAlgorithm | |
enum | DesiredOutputPrecision { SINGLE_PRECISION , DOUBLE_PRECISION , DEFAULT_PRECISION } |
Values used for setting the desired output precision for various algorithms. More... | |
typedef vtkObject | Superclass |
Public Member Functions | |
virtual vtkTypeBool | IsA (const char *type) |
Return 1 if this class is the same type of (or a subclass of) the named class. | |
vtkMoleculeMapper * | NewInstance () const |
void | PrintSelf (ostream &os, vtkIndent indent) override |
Methods invoked by print to print information about the object including superclasses. | |
void | UseBallAndStickSettings () |
Set ivars to default ball-and-stick settings. | |
void | UseVDWSpheresSettings () |
Set ivars to default van der Waals spheres settings. | |
void | UseLiquoriceStickSettings () |
Set ivars to default liquorice stick settings. | |
void | UseFastSettings () |
Set ivars to use fast settings that may be useful for rendering extremely large molecules where the overall shape is more important than the details of the atoms/bond. | |
virtual void | SetMapScalars (bool map) |
Helper method to set ScalarMode on both AtomGlyphMapper and BondGlyphMapper. | |
vtkPeriodicTable * | GetPeriodicTable () |
Accessor to internal structure. | |
void | SetInputData (vtkMolecule *in) |
Get/Set the input vtkMolecule. | |
vtkMolecule * | GetInput () |
Get/Set the input vtkMolecule. | |
virtual bool | GetRenderAtoms () |
Get/Set whether or not to render atoms. | |
virtual void | SetRenderAtoms (bool) |
Get/Set whether or not to render atoms. | |
virtual void | RenderAtomsOn () |
Get/Set whether or not to render atoms. | |
virtual void | RenderAtomsOff () |
Get/Set whether or not to render atoms. | |
virtual bool | GetRenderBonds () |
Get/Set whether or not to render bonds. | |
virtual void | SetRenderBonds (bool) |
Get/Set whether or not to render bonds. | |
virtual void | RenderBondsOn () |
Get/Set whether or not to render bonds. | |
virtual void | RenderBondsOff () |
Get/Set whether or not to render bonds. | |
virtual bool | GetRenderLattice () |
Get/Set whether or not to render the unit cell lattice, if present. | |
virtual void | SetRenderLattice (bool) |
Get/Set whether or not to render the unit cell lattice, if present. | |
virtual void | RenderLatticeOn () |
Get/Set whether or not to render the unit cell lattice, if present. | |
virtual void | RenderLatticeOff () |
Get/Set whether or not to render the unit cell lattice, if present. | |
virtual int | GetAtomicRadiusType () |
Get/Set the type of radius used to generate the atoms. | |
virtual void | SetAtomicRadiusType (int) |
Get/Set the type of radius used to generate the atoms. | |
const char * | GetAtomicRadiusTypeAsString () |
Get/Set the type of radius used to generate the atoms. | |
void | SetAtomicRadiusTypeToCovalentRadius () |
Get/Set the type of radius used to generate the atoms. | |
void | SetAtomicRadiusTypeToVDWRadius () |
Get/Set the type of radius used to generate the atoms. | |
void | SetAtomicRadiusTypeToUnitRadius () |
Get/Set the type of radius used to generate the atoms. | |
void | SetAtomicRadiusTypeToCustomArrayRadius () |
Get/Set the type of radius used to generate the atoms. | |
virtual float | GetAtomicRadiusScaleFactor () |
Get/Set the uniform scaling factor applied to the atoms. | |
virtual void | SetAtomicRadiusScaleFactor (float) |
Get/Set the uniform scaling factor applied to the atoms. | |
virtual bool | GetUseMultiCylindersForBonds () |
Get/Set whether multicylinders will be used to represent multiple bonds. | |
virtual void | SetUseMultiCylindersForBonds (bool) |
Get/Set whether multicylinders will be used to represent multiple bonds. | |
virtual void | UseMultiCylindersForBondsOn () |
Get/Set whether multicylinders will be used to represent multiple bonds. | |
virtual void | UseMultiCylindersForBondsOff () |
Get/Set whether multicylinders will be used to represent multiple bonds. | |
virtual int | GetBondColorMode () |
Get/Set the method by which bonds are colored. | |
virtual void | SetBondColorMode (int) |
Get/Set the method by which bonds are colored. | |
void | SetBondColorModeToSingleColor () |
Get/Set the method by which bonds are colored. | |
void | SetBondColorModeToDiscreteByAtom () |
Get/Set the method by which bonds are colored. | |
const char * | GetBondColorModeAsString () |
Get/Set the method by which bonds are colored. | |
virtual int | GetAtomColorMode () |
Get/Set the method by which atoms are colored. | |
virtual void | SetAtomColorMode (int) |
Get/Set the method by which atoms are colored. | |
virtual unsigned char * | GetAtomColor () |
Get/Set the color of the atoms as an rgb tuple. | |
virtual void | GetAtomColor (unsigned char &, unsigned char &, unsigned char &) |
Get/Set the color of the atoms as an rgb tuple. | |
virtual void | GetAtomColor (unsigned char[3]) |
Get/Set the color of the atoms as an rgb tuple. | |
virtual void | SetAtomColor (unsigned char, unsigned char, unsigned char) |
Get/Set the color of the atoms as an rgb tuple. | |
virtual void | SetAtomColor (unsigned char[3]) |
Get/Set the color of the atoms as an rgb tuple. | |
virtual unsigned char * | GetBondColor () |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | GetBondColor (unsigned char &, unsigned char &, unsigned char &) |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | GetBondColor (unsigned char[3]) |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | SetBondColor (unsigned char, unsigned char, unsigned char) |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | SetBondColor (unsigned char[3]) |
Get/Set the color of the bonds as an rgb tuple. | |
virtual float | GetBondRadius () |
Get/Set the radius of the bond cylinders. | |
virtual void | SetBondRadius (float) |
Get/Set the radius of the bond cylinders. | |
virtual unsigned char * | GetLatticeColor () |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | GetLatticeColor (unsigned char &, unsigned char &, unsigned char &) |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | GetLatticeColor (unsigned char[3]) |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | SetLatticeColor (unsigned char, unsigned char, unsigned char) |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | SetLatticeColor (unsigned char[3]) |
Get/Set the color of the bonds as an rgb tuple. | |
virtual void | GetSelectedAtomsAndBonds (vtkSelection *selection, vtkIdTypeArray *atomIds, vtkIdTypeArray *bondIds) |
Extract the ids atoms and/or bonds rendered by this molecule from a vtkSelection object. | |
virtual void | GetSelectedAtoms (vtkSelection *selection, vtkIdTypeArray *atomIds) |
Extract the ids atoms and/or bonds rendered by this molecule from a vtkSelection object. | |
virtual void | GetSelectedBonds (vtkSelection *selection, vtkIdTypeArray *bondIds) |
Extract the ids atoms and/or bonds rendered by this molecule from a vtkSelection object. | |
void | Render (vtkRenderer *, vtkActor *) override |
Reimplemented from base class. | |
void | ReleaseGraphicsResources (vtkWindow *) override |
Reimplemented from base class. | |
double * | GetBounds () override |
Reimplemented from base class. | |
void | GetBounds (double bounds[6]) override |
Reimplemented from base class. | |
int | FillInputPortInformation (int port, vtkInformation *info) override |
Reimplemented from base class. | |
bool | GetSupportsSelection () override |
Reimplemented from base class. | |
virtual char * | GetAtomicRadiusArrayName () |
Get/Set the atomic radius array name. | |
virtual void | SetAtomicRadiusArrayName (const char *) |
Get/Set the atomic radius array name. | |
Public Member Functions inherited from vtkMapper | |
virtual vtkTypeBool | IsA (const char *type) |
Return 1 if this class is the same type of (or a subclass of) the named class. | |
vtkMapper * | NewInstance () const |
void | PrintSelf (ostream &os, vtkIndent indent) override |
Methods invoked by print to print information about the object including superclasses. | |
void | ShallowCopy (vtkAbstractMapper *m) override |
Make a shallow copy of this mapper. | |
vtkMTimeType | GetMTime () override |
Overload standard modified time function. | |
virtual void | Render (vtkRenderer *ren, vtkActor *a)=0 |
Method initiates the mapping process. | |
void | ReleaseGraphicsResources (vtkWindow *) override |
Release any graphics resources that are being consumed by this mapper. | |
virtual void | CreateDefaultLookupTable () |
Create default lookup table. | |
const char * | GetColorModeAsString () |
Return the method of coloring scalar data. | |
virtual void | SetScalarMode (int) |
Control how the filter works with scalar point data and cell attribute data. | |
virtual int | GetScalarMode () |
void | SetScalarModeToDefault () |
void | SetScalarModeToUsePointData () |
void | SetScalarModeToUseCellData () |
void | SetScalarModeToUsePointFieldData () |
void | SetScalarModeToUseCellFieldData () |
void | SetScalarModeToUseFieldData () |
virtual void | SetFieldDataTupleId (vtkIdType) |
virtual vtkIdType | GetFieldDataTupleId () |
virtual char * | GetArrayName () |
Set/Get the array name or number and component to color by. | |
virtual void | SetArrayName (const char *) |
virtual int | GetArrayId () |
virtual void | SetArrayId (int) |
virtual int | GetArrayAccessMode () |
virtual void | SetArrayAccessMode (int) |
virtual int | GetArrayComponent () |
virtual void | SetArrayComponent (int) |
const char * | GetScalarModeAsString () |
Return the method for obtaining scalar data. | |
double * | GetBounds () override |
Return bounding box (array of six doubles) of data expressed as (xmin,xmax, ymin,ymax, zmin,zmax). | |
void | GetBounds (double bounds[6]) override |
Get the bounds for this mapper as (Xmin,Xmax,Ymin,Ymax,Zmin,Zmax). | |
void | SetRenderTime (double time) |
This instance variable is used by vtkLODActor to determine which mapper to use. | |
virtual double | GetRenderTime () |
vtkDataSet * | GetInput () |
Get the input as a vtkDataSet. | |
vtkDataSet * | GetInputAsDataSet () |
Get the input to this mapper as a vtkDataSet, instead of as a more specialized data type that the subclass may return from GetInput(). | |
virtual bool | GetSupportsSelection () |
WARNING: INTERNAL METHOD - NOT INTENDED FOR GENERAL USE DO NOT USE THIS METHOD OUTSIDE OF THE RENDERING PROCESS Used by vtkHardwareSelector to determine if the prop supports hardware selection. | |
virtual void | ProcessSelectorPixelBuffers (vtkHardwareSelector *, std::vector< unsigned int > &, vtkProp *) |
allows a mapper to update a selections color buffers Called from a prop which in turn is called from the selector | |
virtual int | CanUseTextureMapForColoring (vtkDataObject *input) |
Returns if we can use texture maps for scalar coloring. | |
void | ClearColorArrays () |
Call to force a rebuild of color result arrays on next MapScalars. | |
vtkUnsignedCharArray * | GetColorMapColors () |
Provide read access to the color array. | |
vtkFloatArray * | GetColorCoordinates () |
Provide read access to the color texture coordinate array. | |
vtkImageData * | GetColorTextureMap () |
Provide read access to the color texture array. | |
void | SetLookupTable (vtkScalarsToColors *lut) |
Specify a lookup table for the mapper to use. | |
vtkScalarsToColors * | GetLookupTable () |
Specify a lookup table for the mapper to use. | |
virtual void | SetScalarVisibility (vtkTypeBool) |
Turn on/off flag to control whether scalar data is used to color objects. | |
virtual vtkTypeBool | GetScalarVisibility () |
Turn on/off flag to control whether scalar data is used to color objects. | |
virtual void | ScalarVisibilityOn () |
Turn on/off flag to control whether scalar data is used to color objects. | |
virtual void | ScalarVisibilityOff () |
Turn on/off flag to control whether scalar data is used to color objects. | |
virtual void | SetStatic (vtkTypeBool) |
Turn on/off flag to control whether the mapper's data is static. | |
virtual vtkTypeBool | GetStatic () |
Turn on/off flag to control whether the mapper's data is static. | |
virtual void | StaticOn () |
Turn on/off flag to control whether the mapper's data is static. | |
virtual void | StaticOff () |
Turn on/off flag to control whether the mapper's data is static. | |
virtual void | SetColorMode (int) |
default (ColorModeToDefault), unsigned char scalars are treated as colors, and NOT mapped through the lookup table, while everything else is. | |
virtual int | GetColorMode () |
default (ColorModeToDefault), unsigned char scalars are treated as colors, and NOT mapped through the lookup table, while everything else is. | |
void | SetColorModeToDefault () |
default (ColorModeToDefault), unsigned char scalars are treated as colors, and NOT mapped through the lookup table, while everything else is. | |
void | SetColorModeToMapScalars () |
default (ColorModeToDefault), unsigned char scalars are treated as colors, and NOT mapped through the lookup table, while everything else is. | |
void | SetColorModeToDirectScalars () |
default (ColorModeToDefault), unsigned char scalars are treated as colors, and NOT mapped through the lookup table, while everything else is. | |
virtual void | SetInterpolateScalarsBeforeMapping (vtkTypeBool) |
By default, vertex color is used to map colors to a surface. | |
virtual vtkTypeBool | GetInterpolateScalarsBeforeMapping () |
By default, vertex color is used to map colors to a surface. | |
virtual void | InterpolateScalarsBeforeMappingOn () |
By default, vertex color is used to map colors to a surface. | |
virtual void | InterpolateScalarsBeforeMappingOff () |
By default, vertex color is used to map colors to a surface. | |
virtual void | SetUseLookupTableScalarRange (vtkTypeBool) |
Control whether the mapper sets the lookuptable range based on its own ScalarRange, or whether it will use the LookupTable ScalarRange regardless of it's own setting. | |
virtual vtkTypeBool | GetUseLookupTableScalarRange () |
Control whether the mapper sets the lookuptable range based on its own ScalarRange, or whether it will use the LookupTable ScalarRange regardless of it's own setting. | |
virtual void | UseLookupTableScalarRangeOn () |
Control whether the mapper sets the lookuptable range based on its own ScalarRange, or whether it will use the LookupTable ScalarRange regardless of it's own setting. | |
virtual void | UseLookupTableScalarRangeOff () |
Control whether the mapper sets the lookuptable range based on its own ScalarRange, or whether it will use the LookupTable ScalarRange regardless of it's own setting. | |
virtual void | SetScalarRange (double, double) |
Specify range in terms of scalar minimum and maximum (smin,smax). | |
void | SetScalarRange (double[2]) |
Specify range in terms of scalar minimum and maximum (smin,smax). | |
virtual double * | GetScalarRange () |
Specify range in terms of scalar minimum and maximum (smin,smax). | |
virtual void | GetScalarRange (double data[2]) |
Specify range in terms of scalar minimum and maximum (smin,smax). | |
void | SelectColorArray (int arrayNum) |
When ScalarMode is set to UsePointFieldData or UseCellFieldData, you can specify which array to use for coloring using these methods. | |
void | SelectColorArray (const char *arrayName) |
When ScalarMode is set to UsePointFieldData or UseCellFieldData, you can specify which array to use for coloring using these methods. | |
void | ColorByArrayComponent (int arrayNum, int component) |
Legacy: These methods used to be used to specify the array component. | |
void | ColorByArrayComponent (const char *arrayName, int component) |
Legacy: These methods used to be used to specify the array component. | |
void | SetRelativeCoincidentTopologyPolygonOffsetParameters (double factor, double units) |
Used to set the polygon offset values relative to the global Used when ResolveCoincidentTopology is set to PolygonOffset. | |
void | GetRelativeCoincidentTopologyPolygonOffsetParameters (double &factor, double &units) |
Used to set the polygon offset values relative to the global Used when ResolveCoincidentTopology is set to PolygonOffset. | |
void | SetRelativeCoincidentTopologyLineOffsetParameters (double factor, double units) |
Used to set the line offset values relative to the global Used when ResolveCoincidentTopology is set to PolygonOffset. | |
void | GetRelativeCoincidentTopologyLineOffsetParameters (double &factor, double &units) |
Used to set the line offset values relative to the global Used when ResolveCoincidentTopology is set to PolygonOffset. | |
void | SetRelativeCoincidentTopologyPointOffsetParameter (double units) |
Used to set the point offset value relative to the global Used when ResolveCoincidentTopology is set to PolygonOffset. | |
void | GetRelativeCoincidentTopologyPointOffsetParameter (double &units) |
Used to set the point offset value relative to the global Used when ResolveCoincidentTopology is set to PolygonOffset. | |
void | GetCoincidentTopologyPolygonOffsetParameters (double &factor, double &units) |
Get the net parameters for handling coincident topology obtained by summing the global values with the relative values. | |
void | GetCoincidentTopologyLineOffsetParameters (double &factor, double &units) |
Get the net parameters for handling coincident topology obtained by summing the global values with the relative values. | |
void | GetCoincidentTopologyPointOffsetParameter (double &units) |
Get the net parameters for handling coincident topology obtained by summing the global values with the relative values. | |
virtual vtkUnsignedCharArray * | MapScalars (double alpha) |
Map the scalars (if there are any scalars and ScalarVisibility is on) through the lookup table, returning an unsigned char RGBA array. | |
virtual vtkUnsignedCharArray * | MapScalars (double alpha, int &cellFlag) |
Map the scalars (if there are any scalars and ScalarVisibility is on) through the lookup table, returning an unsigned char RGBA array. | |
virtual vtkUnsignedCharArray * | MapScalars (vtkDataSet *input, double alpha) |
Map the scalars (if there are any scalars and ScalarVisibility is on) through the lookup table, returning an unsigned char RGBA array. | |
virtual vtkUnsignedCharArray * | MapScalars (vtkDataSet *input, double alpha, int &cellFlag) |
Map the scalars (if there are any scalars and ScalarVisibility is on) through the lookup table, returning an unsigned char RGBA array. | |
virtual bool | HasOpaqueGeometry () |
Some introspection on the type of data the mapper will render used by props to determine if they should invoke the mapper on a specific rendering pass. | |
virtual bool | HasTranslucentPolygonalGeometry () |
Some introspection on the type of data the mapper will render used by props to determine if they should invoke the mapper on a specific rendering pass. | |
virtual vtkSelection * | GetSelection () |
Set/Get selection used to display particular points or cells in a second pass. | |
virtual void | SetSelection (vtkSelection *) |
Set/Get selection used to display particular points or cells in a second pass. | |
Public Member Functions inherited from vtkAbstractMapper3D | |
virtual vtkTypeBool | IsA (const char *type) |
Return 1 if this class is the same type of (or a subclass of) the named class. | |
vtkAbstractMapper3D * | NewInstance () const |
void | PrintSelf (ostream &os, vtkIndent indent) override |
Methods invoked by print to print information about the object including superclasses. | |
virtual double * | GetBounds ()=0 |
Return bounding box (array of six doubles) of data expressed as (xmin,xmax, ymin,ymax, zmin,zmax). | |
virtual void | GetBounds (double bounds[6]) |
Get the bounds for this mapper as (Xmin,Xmax,Ymin,Ymax,Zmin,Zmax). | |
double | GetLength () |
Return the diagonal length of this mappers bounding box. | |
virtual vtkTypeBool | IsARayCastMapper () |
Is this a ray cast mapper? A subclass would return 1 if the ray caster is needed to generate an image from this mapper. | |
virtual vtkTypeBool | IsARenderIntoImageMapper () |
Is this a "render into image" mapper? A subclass would return 1 if the mapper produces an image by rendering into a software image buffer. | |
void | GetClippingPlaneInDataCoords (vtkMatrix4x4 *propMatrix, int i, double planeEquation[4]) |
Get the ith clipping plane as a homogeneous plane equation. | |
double * | GetCenter () |
Return the Center of this mapper's data. | |
void | GetCenter (double center[3]) |
Return the Center of this mapper's data. | |
Public Member Functions inherited from vtkAbstractMapper | |
virtual vtkTypeBool | IsA (const char *type) |
Return 1 if this class is the same type of (or a subclass of) the named class. | |
vtkAbstractMapper * | NewInstance () const |
void | PrintSelf (ostream &os, vtkIndent indent) override |
Methods invoked by print to print information about the object including superclasses. | |
vtkMTimeType | GetMTime () override |
Override Modifiedtime as we have added Clipping planes. | |
virtual void | ReleaseGraphicsResources (vtkWindow *) |
Release any graphics resources that are being consumed by this mapper. | |
void | SetClippingPlanes (vtkPlanes *planes) |
An alternative way to set clipping planes: use up to six planes found in the supplied instance of the implicit function vtkPlanes. | |
virtual void | ShallowCopy (vtkAbstractMapper *m) |
Make a shallow copy of this mapper. | |
int | GetNumberOfClippingPlanes () |
Get the number of clipping planes. | |
virtual double | GetTimeToDraw () |
Get the time required to draw the geometry last time it was rendered. | |
void | AddClippingPlane (vtkPlane *plane) |
Specify clipping planes to be applied when the data is mapped (at most 6 clipping planes can be specified). | |
void | RemoveClippingPlane (vtkPlane *plane) |
Specify clipping planes to be applied when the data is mapped (at most 6 clipping planes can be specified). | |
void | RemoveAllClippingPlanes () |
Specify clipping planes to be applied when the data is mapped (at most 6 clipping planes can be specified). | |
virtual void | SetClippingPlanes (vtkPlaneCollection *) |
Get/Set the vtkPlaneCollection which specifies the clipping planes. | |
virtual vtkPlaneCollection * | GetClippingPlanes () |
Get/Set the vtkPlaneCollection which specifies the clipping planes. | |
Public Member Functions inherited from vtkAlgorithm | |
virtual vtkTypeBool | IsA (const char *type) |
Return 1 if this class is the same type of (or a subclass of) the named class. | |
vtkAlgorithm * | NewInstance () const |
void | PrintSelf (ostream &os, vtkIndent indent) override |
Methods invoked by print to print information about the object including superclasses. | |
int | HasExecutive () |
Check whether this algorithm has an assigned executive. | |
vtkExecutive * | GetExecutive () |
Get this algorithm's executive. | |
virtual void | SetExecutive (vtkExecutive *executive) |
Set this algorithm's executive. | |
virtual vtkTypeBool | ProcessRequest (vtkInformation *request, vtkInformationVector **inInfo, vtkInformationVector *outInfo) |
Upstream/Downstream requests form the generalized interface through which executives invoke a algorithm's functionality. | |
vtkTypeBool | ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo) |
Version of ProcessRequest() that is wrapped. | |
virtual int | ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime) |
A special version of ProcessRequest meant specifically for the pipeline modified time request. | |
virtual int | ModifyRequest (vtkInformation *request, int when) |
This method gives the algorithm a chance to modify the contents of a request before or after (specified in the when argument) it is forwarded. | |
vtkInformation * | GetInputPortInformation (int port) |
Get the information object associated with an input port. | |
vtkInformation * | GetOutputPortInformation (int port) |
Get the information object associated with an output port. | |
int | GetNumberOfInputPorts () |
Get the number of input ports used by the algorithm. | |
int | GetNumberOfOutputPorts () |
Get the number of output ports provided by the algorithm. | |
void | SetProgress (double) |
SetProgress is deprecated. | |
void | UpdateProgress (double amount) |
Update the progress of the process object. | |
virtual void | SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName) |
String based versions of SetInputArrayToProcess(). | |
vtkInformation * | GetInputArrayInformation (int idx) |
Get the info object for the specified input array to this algorithm. | |
void | RemoveAllInputs () |
Remove all the input data. | |
vtkDataObject * | GetOutputDataObject (int port) |
Get the data object that will contain the algorithm output for the given port. | |
vtkDataObject * | GetInputDataObject (int port, int connection) |
Get the data object that will contain the algorithm input for the given port and given connection. | |
virtual void | RemoveInputConnection (int port, vtkAlgorithmOutput *input) |
Remove a connection from the given input port index. | |
virtual void | RemoveInputConnection (int port, int idx) |
Remove a connection given by index idx. | |
virtual void | RemoveAllInputConnections (int port) |
Removes all input connections. | |
virtual void | SetInputDataObject (int port, vtkDataObject *data) |
Sets the data-object as an input on the given port index. | |
virtual void | SetInputDataObject (vtkDataObject *data) |
virtual void | AddInputDataObject (int port, vtkDataObject *data) |
Add the data-object as an input to this given port. | |
virtual void | AddInputDataObject (vtkDataObject *data) |
vtkAlgorithmOutput * | GetOutputPort (int index) |
Get a proxy object corresponding to the given output port of this algorithm. | |
vtkAlgorithmOutput * | GetOutputPort () |
int | GetNumberOfInputConnections (int port) |
Get the number of inputs currently connected to a port. | |
int | GetTotalNumberOfInputConnections () |
Get the total number of inputs for this algorithm. | |
vtkAlgorithmOutput * | GetInputConnection (int port, int index) |
Get the algorithm output port connected to an input port. | |
vtkAlgorithm * | GetInputAlgorithm (int port, int index, int &algPort) |
Returns the algorithm and the output port index of that algorithm connected to a port-index pair. | |
vtkAlgorithm * | GetInputAlgorithm (int port, int index) |
Returns the algorithm connected to a port-index pair. | |
vtkAlgorithm * | GetInputAlgorithm () |
Equivalent to GetInputAlgorithm(0, 0). | |
vtkExecutive * | GetInputExecutive (int port, int index) |
Returns the executive associated with a particular input connection. | |
vtkExecutive * | GetInputExecutive () |
Equivalent to GetInputExecutive(0, 0) | |
vtkInformation * | GetInputInformation (int port, int index) |
Return the information object that is associated with a particular input connection. | |
vtkInformation * | GetInputInformation () |
Equivalent to GetInputInformation(0, 0) | |
vtkInformation * | GetOutputInformation (int port) |
Return the information object that is associated with a particular output port. | |
virtual vtkTypeBool | Update (int port, vtkInformationVector *requests) |
This method enables the passing of data requests to the algorithm to be used during execution (in addition to bringing a particular port up-to-date). | |
virtual vtkTypeBool | Update (vtkInformation *requests) |
Convenience method to update an algorithm after passing requests to its first output port. | |
virtual int | UpdatePiece (int piece, int numPieces, int ghostLevels, const int extents[6]=nullptr) |
Convenience method to update an algorithm after passing requests to its first output port. | |
virtual int | UpdateExtent (const int extents[6]) |
Convenience method to update an algorithm after passing requests to its first output port. | |
virtual int | UpdateTimeStep (double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=nullptr) |
Convenience method to update an algorithm after passing requests to its first output port. | |
virtual void | UpdateInformation () |
Bring the algorithm's information up-to-date. | |
virtual void | UpdateDataObject () |
Create output object(s). | |
virtual void | PropagateUpdateExtent () |
Propagate meta-data upstream. | |
virtual void | UpdateWholeExtent () |
Bring this algorithm's outputs up-to-date. | |
void | ConvertTotalInputToPortConnection (int ind, int &port, int &conn) |
Convenience routine to convert from a linear ordering of input connections to a port/connection pair. | |
virtual vtkInformation * | GetInformation () |
Set/Get the information object associated with this algorithm. | |
virtual void | SetInformation (vtkInformation *) |
Set/Get the information object associated with this algorithm. | |
void | Register (vtkObjectBase *o) override |
Participate in garbage collection. | |
void | UnRegister (vtkObjectBase *o) override |
Participate in garbage collection. | |
virtual void | SetAbortExecute (vtkTypeBool) |
Set/Get the AbortExecute flag for the process object. | |
virtual vtkTypeBool | GetAbortExecute () |
Set/Get the AbortExecute flag for the process object. | |
virtual void | AbortExecuteOn () |
Set/Get the AbortExecute flag for the process object. | |
virtual void | AbortExecuteOff () |
Set/Get the AbortExecute flag for the process object. | |
virtual double | GetProgress () |
Get the execution progress of a process object. | |
void | SetProgressShiftScale (double shift, double scale) |
Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called. | |
virtual double | GetProgressShift () |
Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called. | |
virtual double | GetProgressScale () |
Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called. | |
void | SetProgressText (const char *ptext) |
Set the current text message associated with the progress state. | |
virtual char * | GetProgressText () |
Set the current text message associated with the progress state. | |
virtual unsigned long | GetErrorCode () |
The error code contains a possible error that occurred while reading or writing the file. | |
virtual void | SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name) |
Set the input data arrays that this algorithm will process. | |
virtual void | SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType) |
Set the input data arrays that this algorithm will process. | |
virtual void | SetInputArrayToProcess (int idx, vtkInformation *info) |
Set the input data arrays that this algorithm will process. | |
virtual void | SetInputConnection (int port, vtkAlgorithmOutput *input) |
Set the connection for the given input port index. | |
virtual void | SetInputConnection (vtkAlgorithmOutput *input) |
Set the connection for the given input port index. | |
virtual void | AddInputConnection (int port, vtkAlgorithmOutput *input) |
Add a connection to the given input port index. | |
virtual void | AddInputConnection (vtkAlgorithmOutput *input) |
Add a connection to the given input port index. | |
virtual void | Update (int port) |
Bring this algorithm's outputs up-to-date. | |
virtual void | Update () |
Bring this algorithm's outputs up-to-date. | |
virtual void | SetReleaseDataFlag (int) |
Turn release data flag on or off for all output ports. | |
virtual int | GetReleaseDataFlag () |
Turn release data flag on or off for all output ports. | |
void | ReleaseDataFlagOn () |
Turn release data flag on or off for all output ports. | |
void | ReleaseDataFlagOff () |
Turn release data flag on or off for all output ports. | |
int | UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output) |
This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0. | |
int | UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType) |
This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0. | |
int * | GetUpdateExtent () |
These functions return the update extent for output ports that use 3D extents. | |
int * | GetUpdateExtent (int port) |
These functions return the update extent for output ports that use 3D extents. | |
void | GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1) |
These functions return the update extent for output ports that use 3D extents. | |
void | GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1) |
These functions return the update extent for output ports that use 3D extents. | |
void | GetUpdateExtent (int extent[6]) |
These functions return the update extent for output ports that use 3D extents. | |
void | GetUpdateExtent (int port, int extent[6]) |
These functions return the update extent for output ports that use 3D extents. | |
int | GetUpdatePiece () |
These functions return the update extent for output ports that use piece extents. | |
int | GetUpdatePiece (int port) |
These functions return the update extent for output ports that use piece extents. | |
int | GetUpdateNumberOfPieces () |
These functions return the update extent for output ports that use piece extents. | |
int | GetUpdateNumberOfPieces (int port) |
These functions return the update extent for output ports that use piece extents. | |
int | GetUpdateGhostLevel () |
These functions return the update extent for output ports that use piece extents. | |
int | GetUpdateGhostLevel (int port) |
These functions return the update extent for output ports that use piece extents. | |
void | SetProgressObserver (vtkProgressObserver *) |
If an ProgressObserver is set, the algorithm will report progress through it rather than directly. | |
virtual vtkProgressObserver * | GetProgressObserver () |
If an ProgressObserver is set, the algorithm will report progress through it rather than directly. | |
Public Member Functions inherited from vtkObject | |
vtkBaseTypeMacro (vtkObject, vtkObjectBase) | |
virtual void | DebugOn () |
Turn debugging output on. | |
virtual void | DebugOff () |
Turn debugging output off. | |
bool | GetDebug () |
Get the value of the debug flag. | |
void | SetDebug (bool debugFlag) |
Set the value of the debug flag. | |
virtual void | Modified () |
Update the modification time for this object. | |
virtual vtkMTimeType | GetMTime () |
Return this object's modified time. | |
void | PrintSelf (ostream &os, vtkIndent indent) override |
Methods invoked by print to print information about the object including superclasses. | |
void | RemoveObserver (unsigned long tag) |
void | RemoveObservers (unsigned long event) |
void | RemoveObservers (const char *event) |
void | RemoveAllObservers () |
vtkTypeBool | HasObserver (unsigned long event) |
vtkTypeBool | HasObserver (const char *event) |
int | InvokeEvent (unsigned long event) |
int | InvokeEvent (const char *event) |
unsigned long | AddObserver (unsigned long event, vtkCommand *, float priority=0.0f) |
Allow people to add/remove/invoke observers (callbacks) to any VTK object. | |
unsigned long | AddObserver (const char *event, vtkCommand *, float priority=0.0f) |
Allow people to add/remove/invoke observers (callbacks) to any VTK object. | |
vtkCommand * | GetCommand (unsigned long tag) |
Allow people to add/remove/invoke observers (callbacks) to any VTK object. | |
void | RemoveObserver (vtkCommand *) |
Allow people to add/remove/invoke observers (callbacks) to any VTK object. | |
void | RemoveObservers (unsigned long event, vtkCommand *) |
Allow people to add/remove/invoke observers (callbacks) to any VTK object. | |
void | RemoveObservers (const char *event, vtkCommand *) |
Allow people to add/remove/invoke observers (callbacks) to any VTK object. | |
vtkTypeBool | HasObserver (unsigned long event, vtkCommand *) |
Allow people to add/remove/invoke observers (callbacks) to any VTK object. | |
vtkTypeBool | HasObserver (const char *event, vtkCommand *) |
Allow people to add/remove/invoke observers (callbacks) to any VTK object. | |
template<class U , class T > | |
unsigned long | AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f) |
Overloads to AddObserver that allow developers to add class member functions as callbacks for events. | |
template<class U , class T > | |
unsigned long | AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f) |
Overloads to AddObserver that allow developers to add class member functions as callbacks for events. | |
template<class U , class T > | |
unsigned long | AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f) |
Allow user to set the AbortFlagOn() with the return value of the callback method. | |
int | InvokeEvent (unsigned long event, void *callData) |
This method invokes an event and return whether the event was aborted or not. | |
int | InvokeEvent (const char *event, void *callData) |
This method invokes an event and return whether the event was aborted or not. | |
Public Member Functions inherited from vtkObjectBase | |
const char * | GetClassName () const |
Return the class name as a string. | |
virtual vtkTypeBool | IsA (const char *name) |
Return 1 if this class is the same type of (or a subclass of) the named class. | |
virtual vtkIdType | GetNumberOfGenerationsFromBase (const char *name) |
Given the name of a base class of this class type, return the distance of inheritance between this class type and the named class (how many generations of inheritance are there between this class and the named class). | |
virtual void | Delete () |
Delete a VTK object. | |
virtual void | FastDelete () |
Delete a reference to this object. | |
void | InitializeObjectBase () |
void | Print (ostream &os) |
Print an object to an ostream. | |
virtual void | Register (vtkObjectBase *o) |
Increase the reference count (mark as used by another object). | |
virtual void | UnRegister (vtkObjectBase *o) |
Decrease the reference count (release by another object). | |
int | GetReferenceCount () |
Return the current reference count of this object. | |
void | SetReferenceCount (int) |
Sets the reference count. | |
bool | GetIsInMemkind () const |
A local state flag that remembers whether this object lives in the normal or extended memory space. | |
virtual void | PrintHeader (ostream &os, vtkIndent indent) |
Methods invoked by print to print information about the object including superclasses. | |
virtual void | PrintTrailer (ostream &os, vtkIndent indent) |
Methods invoked by print to print information about the object including superclasses. | |
Static Public Member Functions | |
static vtkMoleculeMapper * | New () |
static vtkTypeBool | IsTypeOf (const char *type) |
static vtkMoleculeMapper * | SafeDownCast (vtkObjectBase *o) |
Static Public Member Functions inherited from vtkMapper | |
static vtkTypeBool | IsTypeOf (const char *type) |
static vtkMapper * | SafeDownCast (vtkObjectBase *o) |
static void | SetResolveCoincidentTopology (int val) |
Set/Get a global flag that controls whether coincident topology (e.g., a line on top of a polygon) is shifted to avoid z-buffer resolution (and hence rendering problems). | |
static int | GetResolveCoincidentTopology () |
Set/Get a global flag that controls whether coincident topology (e.g., a line on top of a polygon) is shifted to avoid z-buffer resolution (and hence rendering problems). | |
static void | SetResolveCoincidentTopologyToDefault () |
Set/Get a global flag that controls whether coincident topology (e.g., a line on top of a polygon) is shifted to avoid z-buffer resolution (and hence rendering problems). | |
static void | SetResolveCoincidentTopologyToOff () |
Set/Get a global flag that controls whether coincident topology (e.g., a line on top of a polygon) is shifted to avoid z-buffer resolution (and hence rendering problems). | |
static void | SetResolveCoincidentTopologyToPolygonOffset () |
Set/Get a global flag that controls whether coincident topology (e.g., a line on top of a polygon) is shifted to avoid z-buffer resolution (and hence rendering problems). | |
static void | SetResolveCoincidentTopologyToShiftZBuffer () |
Set/Get a global flag that controls whether coincident topology (e.g., a line on top of a polygon) is shifted to avoid z-buffer resolution (and hence rendering problems). | |
static void | SetResolveCoincidentTopologyPolygonOffsetParameters (double factor, double units) |
Used to set the polygon offset scale factor and units. | |
static void | GetResolveCoincidentTopologyPolygonOffsetParameters (double &factor, double &units) |
Used to set the polygon offset scale factor and units. | |
static void | SetResolveCoincidentTopologyLineOffsetParameters (double factor, double units) |
Used to set the line offset scale factor and units. | |
static void | GetResolveCoincidentTopologyLineOffsetParameters (double &factor, double &units) |
Used to set the line offset scale factor and units. | |
static void | SetResolveCoincidentTopologyPointOffsetParameter (double units) |
Used to set the point offset value Used when ResolveCoincidentTopology is set to PolygonOffset. | |
static void | GetResolveCoincidentTopologyPointOffsetParameter (double &units) |
Used to set the point offset value Used when ResolveCoincidentTopology is set to PolygonOffset. | |
static void | SetResolveCoincidentTopologyPolygonOffsetFaces (int faces) |
Used when ResolveCoincidentTopology is set to PolygonOffset. | |
static int | GetResolveCoincidentTopologyPolygonOffsetFaces () |
Used when ResolveCoincidentTopology is set to PolygonOffset. | |
static void | SetResolveCoincidentTopologyZShift (double val) |
Used to set the z-shift if ResolveCoincidentTopology is set to ShiftZBuffer. | |
static double | GetResolveCoincidentTopologyZShift () |
Used to set the z-shift if ResolveCoincidentTopology is set to ShiftZBuffer. | |
Static Public Member Functions inherited from vtkAbstractMapper3D | |
static vtkTypeBool | IsTypeOf (const char *type) |
static vtkAbstractMapper3D * | SafeDownCast (vtkObjectBase *o) |
Static Public Member Functions inherited from vtkAbstractMapper | |
static vtkTypeBool | IsTypeOf (const char *type) |
static vtkAbstractMapper * | SafeDownCast (vtkObjectBase *o) |
static vtkDataArray * | GetScalars (vtkDataSet *input, int scalarMode, int arrayAccessMode, int arrayId, const char *arrayName, int &cellFlag) |
Internal helper function for getting the active scalars. | |
static vtkAbstractArray * | GetAbstractScalars (vtkDataSet *input, int scalarMode, int arrayAccessMode, int arrayId, const char *arrayName, int &cellFlag) |
Internal helper function for getting the active scalars as an abstract array. | |
Static Public Member Functions inherited from vtkAlgorithm | |
static vtkAlgorithm * | New () |
static vtkTypeBool | IsTypeOf (const char *type) |
static vtkAlgorithm * | SafeDownCast (vtkObjectBase *o) |
static vtkInformationIntegerKey * | INPUT_IS_OPTIONAL () |
Keys used to specify input port requirements. | |
static vtkInformationIntegerKey * | INPUT_IS_REPEATABLE () |
static vtkInformationInformationVectorKey * | INPUT_REQUIRED_FIELDS () |
static vtkInformationStringVectorKey * | INPUT_REQUIRED_DATA_TYPE () |
static vtkInformationInformationVectorKey * | INPUT_ARRAYS_TO_PROCESS () |
static vtkInformationIntegerKey * | INPUT_PORT () |
static vtkInformationIntegerKey * | INPUT_CONNECTION () |
static vtkInformationIntegerKey * | CAN_PRODUCE_SUB_EXTENT () |
This key tells the executive that a particular output port is capable of producing an arbitrary subextent of the whole extent. | |
static vtkInformationIntegerKey * | CAN_HANDLE_PIECE_REQUEST () |
Key that tells the pipeline that a particular algorithm can or cannot handle piece request. | |
static void | SetDefaultExecutivePrototype (vtkExecutive *proto) |
If the DefaultExecutivePrototype is set, a copy of it is created in CreateDefaultExecutive() using NewInstance(). | |
Static Public Member Functions inherited from vtkObject | |
static vtkObject * | New () |
Create an object with Debug turned off, modified time initialized to zero, and reference counting on. | |
static void | BreakOnError () |
This method is called when vtkErrorMacro executes. | |
static void | SetGlobalWarningDisplay (int val) |
This is a global flag that controls whether any debug, warning or error messages are displayed. | |
static void | GlobalWarningDisplayOn () |
This is a global flag that controls whether any debug, warning or error messages are displayed. | |
static void | GlobalWarningDisplayOff () |
This is a global flag that controls whether any debug, warning or error messages are displayed. | |
static int | GetGlobalWarningDisplay () |
This is a global flag that controls whether any debug, warning or error messages are displayed. | |
Static Public Member Functions inherited from vtkObjectBase | |
static vtkTypeBool | IsTypeOf (const char *name) |
Return 1 if this class type is the same type of (or a subclass of) the named class. | |
static vtkIdType | GetNumberOfGenerationsFromBaseType (const char *name) |
Given a the name of a base class of this class type, return the distance of inheritance between this class type and the named class (how many generations of inheritance are there between this class and the named class). | |
static vtkObjectBase * | New () |
Create an object with Debug turned off, modified time initialized to zero, and reference counting on. | |
static void | SetMemkindDirectory (const char *directoryname) |
The name of a directory, ideally mounted -o dax, to memory map an extended memory space within. | |
static bool | GetUsingMemkind () |
A global state flag that controls whether vtkObjects are constructed in the usual way (the default) or within the extended memory space. | |
Protected Member Functions | |
virtual vtkObjectBase * | NewInstanceInternal () const |
vtkMoleculeMapper () | |
~vtkMoleculeMapper () override | |
void | GlyphRender (vtkRenderer *ren, vtkActor *act) |
Internal render methods. | |
virtual void | UpdateLatticePolyData () |
Protected Member Functions inherited from vtkMapper | |
virtual vtkObjectBase * | NewInstanceInternal () const |
vtkMapper () | |
~vtkMapper () override | |
void | MapScalarsToTexture (vtkAbstractArray *scalars, double alpha) |
Protected Member Functions inherited from vtkAbstractMapper3D | |
virtual vtkObjectBase * | NewInstanceInternal () const |
vtkAbstractMapper3D () | |
~vtkAbstractMapper3D () override=default | |
Protected Member Functions inherited from vtkAbstractMapper | |
virtual vtkObjectBase * | NewInstanceInternal () const |
vtkAbstractMapper () | |
~vtkAbstractMapper () override | |
Protected Member Functions inherited from vtkAlgorithm | |
virtual vtkObjectBase * | NewInstanceInternal () const |
vtkAlgorithm () | |
~vtkAlgorithm () override | |
virtual int | FillInputPortInformation (int port, vtkInformation *info) |
Fill the input port information objects for this algorithm. | |
virtual int | FillOutputPortInformation (int port, vtkInformation *info) |
Fill the output port information objects for this algorithm. | |
virtual void | SetNumberOfInputPorts (int n) |
Set the number of input ports used by the algorithm. | |
virtual void | SetNumberOfOutputPorts (int n) |
Set the number of output ports provided by the algorithm. | |
int | InputPortIndexInRange (int index, const char *action) |
int | OutputPortIndexInRange (int index, const char *action) |
int | GetInputArrayAssociation (int idx, vtkInformationVector **inputVector) |
Get the assocition of the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. | |
vtkInformation * | GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector) |
This method takes in an index (as specified in SetInputArrayToProcess) and a pipeline information vector. | |
virtual vtkExecutive * | CreateDefaultExecutive () |
Create a default executive. | |
void | ReportReferences (vtkGarbageCollector *) override |
virtual void | SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input) |
Replace the Nth connection on the given input port. | |
virtual void | SetNumberOfInputConnections (int port, int n) |
Set the number of input connections on the given input port. | |
void | SetInputDataInternal (int port, vtkDataObject *input) |
These methods are used by subclasses to implement methods to set data objects directly as input. | |
void | AddInputDataInternal (int port, vtkDataObject *input) |
int | GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector) |
Filters that have multiple connections on one port can use this signature. | |
int | GetInputArrayAssociation (int idx, vtkDataObject *input) |
Filters that have multiple connections on one port can use this signature. | |
vtkDataArray * | GetInputArrayToProcess (int idx, vtkInformationVector **inputVector) |
Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. | |
vtkDataArray * | GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association) |
Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. | |
vtkDataArray * | GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector) |
Filters that have multiple connections on one port can use this signature. | |
vtkDataArray * | GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association) |
Filters that have multiple connections on one port can use this signature. | |
vtkDataArray * | GetInputArrayToProcess (int idx, vtkDataObject *input) |
Filters that have multiple connections on one port can use this signature. | |
vtkDataArray * | GetInputArrayToProcess (int idx, vtkDataObject *input, int &association) |
Filters that have multiple connections on one port can use this signature. | |
vtkAbstractArray * | GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector) |
Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. | |
vtkAbstractArray * | GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association) |
Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. | |
vtkAbstractArray * | GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector) |
Filters that have multiple connections on one port can use this signature. | |
vtkAbstractArray * | GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association) |
Filters that have multiple connections on one port can use this signature. | |
vtkAbstractArray * | GetInputAbstractArrayToProcess (int idx, vtkDataObject *input) |
Filters that have multiple connections on one port can use this signature. | |
vtkAbstractArray * | GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association) |
Filters that have multiple connections on one port can use this signature. | |
virtual void | SetErrorCode (unsigned long) |
The error code contains a possible error that occurred while reading or writing the file. | |
Protected Member Functions inherited from vtkObject | |
vtkObject () | |
~vtkObject () override | |
void | RegisterInternal (vtkObjectBase *, vtkTypeBool check) override |
void | UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) override |
void | InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=nullptr) |
These methods allow a command to exclusively grab all events. | |
void | InternalReleaseFocus () |
These methods allow a command to exclusively grab all events. | |
Protected Member Functions inherited from vtkObjectBase | |
vtkObjectBase () | |
virtual | ~vtkObjectBase () |
virtual void | RegisterInternal (vtkObjectBase *, vtkTypeBool check) |
virtual void | UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) |
virtual void | ReportReferences (vtkGarbageCollector *) |
vtkObjectBase (const vtkObjectBase &) | |
void | operator= (const vtkObjectBase &) |
Protected Attributes | |
bool | RenderLattice |
unsigned char | LatticeColor [3] |
vtkNew< vtkPolyData > | LatticePolyData |
vtkNew< vtkPolyDataMapper > | LatticeMapper |
vtkNew< vtkPeriodicTable > | PeriodicTable |
Periodic table for lookups. | |
bool | RenderAtoms |
Customize atom rendering. | |
int | AtomicRadiusType |
Customize atom rendering. | |
float | AtomicRadiusScaleFactor |
Customize atom rendering. | |
char * | AtomicRadiusArrayName |
Customize atom rendering. | |
int | AtomColorMode |
Customize atom rendering. | |
unsigned char | AtomColor [3] |
Customize atom rendering. | |
bool | RenderBonds |
Customize bond rendering. | |
int | BondColorMode |
Customize bond rendering. | |
bool | UseMultiCylindersForBonds |
Customize bond rendering. | |
float | BondRadius |
Customize bond rendering. | |
unsigned char | BondColor [3] |
Customize bond rendering. | |
vtkNew< vtkGlyph3DMapper > | AtomGlyphMapper |
Internal mappers. | |
vtkNew< vtkGlyph3DMapper > | BondGlyphMapper |
Internal mappers. | |
Protected Attributes inherited from vtkMapper | |
vtkUnsignedCharArray * | Colors |
vtkTypeBool | InterpolateScalarsBeforeMapping |
vtkFloatArray * | ColorCoordinates |
vtkImageData * | ColorTextureMap |
vtkScalarsToColors * | LookupTable |
vtkTypeBool | ScalarVisibility |
vtkTimeStamp | BuildTime |
double | ScalarRange [2] |
vtkTypeBool | UseLookupTableScalarRange |
int | ColorMode |
int | ScalarMode |
double | RenderTime |
int | ArrayId |
char * | ArrayName |
int | ArrayComponent |
int | ArrayAccessMode |
vtkIdType | FieldDataTupleId |
vtkTypeBool | Static |
double | CoincidentPolygonFactor |
double | CoincidentPolygonOffset |
double | CoincidentLineFactor |
double | CoincidentLineOffset |
double | CoincidentPointOffset |
vtkSelection * | Selection = nullptr |
Protected Attributes inherited from vtkAbstractMapper3D | |
double | Bounds [6] |
double | Center [3] |
Protected Attributes inherited from vtkAbstractMapper | |
vtkTimerLog * | Timer |
double | TimeToDraw |
vtkWindow * | LastWindow |
vtkPlaneCollection * | ClippingPlanes |
Protected Attributes inherited from vtkAlgorithm | |
vtkInformation * | Information |
double | Progress |
char * | ProgressText |
vtkProgressObserver * | ProgressObserver |
unsigned long | ErrorCode |
The error code contains a possible error that occurred while reading or writing the file. | |
Protected Attributes inherited from vtkObject | |
bool | Debug |
vtkTimeStamp | MTime |
vtkSubjectHelper * | SubjectHelper |
Protected Attributes inherited from vtkObjectBase | |
std::atomic< int32_t > | ReferenceCount |
vtkWeakPointerBase ** | WeakPointers |
vtkNew< vtkPolyData > | AtomGlyphPolyData |
Cached variables and update methods. | |
vtkNew< vtkTrivialProducer > | AtomGlyphPointOutput |
Cached variables and update methods. | |
vtkNew< vtkPolyData > | BondGlyphPolyData |
Cached variables and update methods. | |
vtkNew< vtkTrivialProducer > | BondGlyphPointOutput |
Cached variables and update methods. | |
bool | GlyphDataInitialized |
Cached variables and update methods. | |
virtual void | UpdateGlyphPolyData () |
Cached variables and update methods. | |
virtual void | UpdateAtomGlyphPolyData () |
Cached variables and update methods. | |
virtual void | UpdateBondGlyphPolyData () |
Cached variables and update methods. | |
Additional Inherited Members | |
Public Attributes inherited from vtkAlgorithm | |
vtkTypeBool | AbortExecute |
Static Protected Member Functions inherited from vtkAlgorithm | |
static vtkInformationIntegerKey * | PORT_REQUIREMENTS_FILLED () |
Static Protected Member Functions inherited from vtkObjectBase | |
static vtkMallocingFunction | GetCurrentMallocFunction () |
static vtkReallocingFunction | GetCurrentReallocFunction () |
static vtkFreeingFunction | GetCurrentFreeFunction () |
static vtkFreeingFunction | GetAlternateFreeFunction () |
Static Protected Attributes inherited from vtkAlgorithm | |
static vtkExecutive * | DefaultExecutivePrototype |
Mapper that draws vtkMolecule objects.
vtkMoleculeMapper uses glyphs (display lists) to quickly render a molecule.
Definition at line 62 of file vtkMoleculeMapper.h.
Definition at line 66 of file vtkMoleculeMapper.h.
anonymous enum |
Enumerator | |
---|---|
CovalentRadius | |
VDWRadius | |
UnitRadius | |
CustomArrayRadius |
Definition at line 160 of file vtkMoleculeMapper.h.
anonymous enum |
Enumerator | |
---|---|
SingleColor | |
DiscreteByAtom |
Definition at line 203 of file vtkMoleculeMapper.h.
|
protected |
|
overrideprotected |
|
static |
|
static |
|
virtual |
Return 1 if this class is the same type of (or a subclass of) the named class.
Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.
Reimplemented from vtkMapper.
Reimplemented in vtkOpenGLMoleculeMapper.
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Reimplemented from vtkMapper.
Reimplemented in vtkOpenGLMoleculeMapper.
vtkMoleculeMapper * vtkMoleculeMapper::NewInstance | ( | ) | const |
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Methods invoked by print to print information about the object including superclasses.
Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from vtkAlgorithm.
Reimplemented in vtkOpenGLMoleculeMapper.
void vtkMoleculeMapper::SetInputData | ( | vtkMolecule * | in | ) |
Get/Set the input vtkMolecule.
vtkMolecule * vtkMoleculeMapper::GetInput | ( | ) |
Get/Set the input vtkMolecule.
void vtkMoleculeMapper::UseBallAndStickSettings | ( | ) |
Set ivars to default ball-and-stick settings.
This is equivalent to the following:
void vtkMoleculeMapper::UseVDWSpheresSettings | ( | ) |
Set ivars to default van der Waals spheres settings.
This is equivalent to the following:
void vtkMoleculeMapper::UseLiquoriceStickSettings | ( | ) |
Set ivars to default liquorice stick settings.
This is equivalent to the following:
void vtkMoleculeMapper::UseFastSettings | ( | ) |
Set ivars to use fast settings that may be useful for rendering extremely large molecules where the overall shape is more important than the details of the atoms/bond.
This is equivalent to the following:
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Get/Set whether or not to render atoms.
Default: On.
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Get/Set whether or not to render atoms.
Default: On.
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Get/Set whether or not to render atoms.
Default: On.
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Get/Set whether or not to render atoms.
Default: On.
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Get/Set whether or not to render bonds.
Default: On.
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Get/Set whether or not to render bonds.
Default: On.
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Get/Set whether or not to render bonds.
Default: On.
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Get/Set whether or not to render bonds.
Default: On.
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Get/Set whether or not to render the unit cell lattice, if present.
Default: On.
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Get/Set whether or not to render the unit cell lattice, if present.
Default: On.
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Get/Set whether or not to render the unit cell lattice, if present.
Default: On.
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Get/Set whether or not to render the unit cell lattice, if present.
Default: On.
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Get/Set the type of radius used to generate the atoms.
Default: VDWRadius. If CustomArrayRadius is used, the VertexData array named 'radii' is used for per-atom radii.
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Get/Set the type of radius used to generate the atoms.
Default: VDWRadius. If CustomArrayRadius is used, the VertexData array named 'radii' is used for per-atom radii.
const char * vtkMoleculeMapper::GetAtomicRadiusTypeAsString | ( | ) |
Get/Set the type of radius used to generate the atoms.
Default: VDWRadius. If CustomArrayRadius is used, the VertexData array named 'radii' is used for per-atom radii.
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Get/Set the type of radius used to generate the atoms.
Default: VDWRadius. If CustomArrayRadius is used, the VertexData array named 'radii' is used for per-atom radii.
Definition at line 177 of file vtkMoleculeMapper.h.
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Get/Set the type of radius used to generate the atoms.
Default: VDWRadius. If CustomArrayRadius is used, the VertexData array named 'radii' is used for per-atom radii.
Definition at line 178 of file vtkMoleculeMapper.h.
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Get/Set the type of radius used to generate the atoms.
Default: VDWRadius. If CustomArrayRadius is used, the VertexData array named 'radii' is used for per-atom radii.
Definition at line 179 of file vtkMoleculeMapper.h.
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Get/Set the type of radius used to generate the atoms.
Default: VDWRadius. If CustomArrayRadius is used, the VertexData array named 'radii' is used for per-atom radii.
Definition at line 180 of file vtkMoleculeMapper.h.
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Get/Set the uniform scaling factor applied to the atoms.
This is ignored when AtomicRadiusType == CustomArrayRadius. Default: 0.3.
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Get/Set the uniform scaling factor applied to the atoms.
This is ignored when AtomicRadiusType == CustomArrayRadius. Default: 0.3.
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Get/Set whether multicylinders will be used to represent multiple bonds.
Default: On.
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Get/Set whether multicylinders will be used to represent multiple bonds.
Default: On.
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Get/Set whether multicylinders will be used to represent multiple bonds.
Default: On.
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Get/Set whether multicylinders will be used to represent multiple bonds.
Default: On.
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Get/Set the method by which bonds are colored.
If 'SingleColor' is used, all bonds will be the same color. Use SetBondColor to set the rgb values used.
If 'DiscreteByAtom' is selected, each bond is colored using the same lookup table as the atoms at each end, with a sharp color boundary at the bond center.
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Get/Set the method by which bonds are colored.
If 'SingleColor' is used, all bonds will be the same color. Use SetBondColor to set the rgb values used.
If 'DiscreteByAtom' is selected, each bond is colored using the same lookup table as the atoms at each end, with a sharp color boundary at the bond center.
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Get/Set the method by which bonds are colored.
If 'SingleColor' is used, all bonds will be the same color. Use SetBondColor to set the rgb values used.
If 'DiscreteByAtom' is selected, each bond is colored using the same lookup table as the atoms at each end, with a sharp color boundary at the bond center.
Definition at line 222 of file vtkMoleculeMapper.h.
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Get/Set the method by which bonds are colored.
If 'SingleColor' is used, all bonds will be the same color. Use SetBondColor to set the rgb values used.
If 'DiscreteByAtom' is selected, each bond is colored using the same lookup table as the atoms at each end, with a sharp color boundary at the bond center.
Definition at line 223 of file vtkMoleculeMapper.h.
const char * vtkMoleculeMapper::GetBondColorModeAsString | ( | ) |
Get/Set the method by which bonds are colored.
If 'SingleColor' is used, all bonds will be the same color. Use SetBondColor to set the rgb values used.
If 'DiscreteByAtom' is selected, each bond is colored using the same lookup table as the atoms at each end, with a sharp color boundary at the bond center.
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Get/Set the method by which atoms are colored.
If 'SingleColor' is used, all atoms will have the same color. Use SetAtomColor to set the rgb values to be used.
If 'DiscreteByAtom' is selected, each atom is colored using the internal lookup table.
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Get/Set the method by which atoms are colored.
If 'SingleColor' is used, all atoms will have the same color. Use SetAtomColor to set the rgb values to be used.
If 'DiscreteByAtom' is selected, each atom is colored using the internal lookup table.
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Get/Set the color of the atoms as an rgb tuple.
Default: {150, 150, 150} (grey)
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Get/Set the color of the atoms as an rgb tuple.
Default: {150, 150, 150} (grey)
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Get/Set the color of the atoms as an rgb tuple.
Default: {150, 150, 150} (grey)
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Get/Set the color of the atoms as an rgb tuple.
Default: {150, 150, 150} (grey)
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Get/Set the color of the atoms as an rgb tuple.
Default: {150, 150, 150} (grey)
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Get/Set the color of the bonds as an rgb tuple.
Default: {50, 50, 50} (dark grey)
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Get/Set the color of the bonds as an rgb tuple.
Default: {50, 50, 50} (dark grey)
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Get/Set the color of the bonds as an rgb tuple.
Default: {50, 50, 50} (dark grey)
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Get/Set the color of the bonds as an rgb tuple.
Default: {50, 50, 50} (dark grey)
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Get/Set the color of the bonds as an rgb tuple.
Default: {50, 50, 50} (dark grey)
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Get/Set the radius of the bond cylinders.
Default: 0.075
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Get/Set the radius of the bond cylinders.
Default: 0.075
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Get/Set the color of the bonds as an rgb tuple.
Default: {255, 255, 255} (white)
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Get/Set the color of the bonds as an rgb tuple.
Default: {255, 255, 255} (white)
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virtual |
Get/Set the color of the bonds as an rgb tuple.
Default: {255, 255, 255} (white)
|
virtual |
Get/Set the color of the bonds as an rgb tuple.
Default: {255, 255, 255} (white)
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Get/Set the color of the bonds as an rgb tuple.
Default: {255, 255, 255} (white)
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Extract the ids atoms and/or bonds rendered by this molecule from a vtkSelection object.
The vtkIdTypeArray
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inlinevirtual |
Extract the ids atoms and/or bonds rendered by this molecule from a vtkSelection object.
The vtkIdTypeArray
Definition at line 283 of file vtkMoleculeMapper.h.
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inlinevirtual |
Extract the ids atoms and/or bonds rendered by this molecule from a vtkSelection object.
The vtkIdTypeArray
Definition at line 287 of file vtkMoleculeMapper.h.
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overridevirtual |
Reimplemented from base class.
Reimplemented from vtkAbstractMapper.
Reimplemented in vtkOpenGLMoleculeMapper.
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overridevirtual |
Reimplemented from base class.
Implements vtkAbstractMapper3D.
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inlineoverridevirtual |
Reimplemented from base class.
Reimplemented from vtkAbstractMapper3D.
Definition at line 300 of file vtkMoleculeMapper.h.
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overridevirtual |
Reimplemented from base class.
Reimplemented from vtkAlgorithm.
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Reimplemented from base class.
Reimplemented from vtkMapper.
Definition at line 302 of file vtkMoleculeMapper.h.
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Get/Set the atomic radius array name.
Default: "radii" It is only used when AtomicRadiusType is set to CustomArrayRadius.
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Get/Set the atomic radius array name.
Default: "radii" It is only used when AtomicRadiusType is set to CustomArrayRadius.
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Helper method to set ScalarMode on both AtomGlyphMapper and BondGlyphMapper.
true means VTK_COLOR_MODE_MAP_SCALARS, false VTK_COLOR_MODE_DIRECT_SCALARS.
Reimplemented in vtkOpenGLMoleculeMapper.
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Accessor to internal structure.
This is exposed to make it available for ray tracers.
Definition at line 323 of file vtkMoleculeMapper.h.
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Internal render methods.
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Cached variables and update methods.
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protectedvirtual |
Cached variables and update methods.
Reimplemented in vtkOpenGLMoleculeMapper.
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Cached variables and update methods.
Reimplemented in vtkOpenGLMoleculeMapper.
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Customize atom rendering.
Definition at line 333 of file vtkMoleculeMapper.h.
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Customize atom rendering.
Definition at line 334 of file vtkMoleculeMapper.h.
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Customize atom rendering.
Definition at line 335 of file vtkMoleculeMapper.h.
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Customize atom rendering.
Definition at line 336 of file vtkMoleculeMapper.h.
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Customize atom rendering.
Definition at line 337 of file vtkMoleculeMapper.h.
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Customize atom rendering.
Definition at line 338 of file vtkMoleculeMapper.h.
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Customize bond rendering.
Definition at line 345 of file vtkMoleculeMapper.h.
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Customize bond rendering.
Definition at line 346 of file vtkMoleculeMapper.h.
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Customize bond rendering.
Definition at line 347 of file vtkMoleculeMapper.h.
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Customize bond rendering.
Definition at line 348 of file vtkMoleculeMapper.h.
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Customize bond rendering.
Definition at line 349 of file vtkMoleculeMapper.h.
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Definition at line 352 of file vtkMoleculeMapper.h.
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Cached variables and update methods.
Definition at line 363 of file vtkMoleculeMapper.h.
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Cached variables and update methods.
Definition at line 364 of file vtkMoleculeMapper.h.
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Cached variables and update methods.
Definition at line 365 of file vtkMoleculeMapper.h.
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Cached variables and update methods.
Definition at line 366 of file vtkMoleculeMapper.h.
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Cached variables and update methods.
Definition at line 367 of file vtkMoleculeMapper.h.
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Internal mappers.
Definition at line 377 of file vtkMoleculeMapper.h.
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Internal mappers.
Definition at line 378 of file vtkMoleculeMapper.h.
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protected |
Definition at line 381 of file vtkMoleculeMapper.h.
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protected |
Definition at line 382 of file vtkMoleculeMapper.h.
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Definition at line 383 of file vtkMoleculeMapper.h.
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Periodic table for lookups.
Definition at line 389 of file vtkMoleculeMapper.h.